MLOC_60294 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains35.759843.666440.76142.6284
LEAShoots from the seedlings (10 cm shoot stage)39.115927.292130.254927.6388
INF1Young developing inflorescences (5mm)97.400694.393594.993483.3756
INF2Developing inflorescences (1-1.5 cm)102.509100.16695.4071108.858
ROORoots from the seedlings (10 cm shoot stage)36.266544.157938.214151.4815
NODDeveloping tillers at six leaf stage, 3rd internode15.322523.152327.870974.4981
CAR5Developing grain, bracts removed (5 DPA)89.146484.072985.083182.3069
CAR15Developing grain, bracts removed (15 DPA)33.968432.51131.080478.0493



CDS Structure of MLOC_60294






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_60294.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK363388NoneNoneNoneNone
MLOC_60294.2CUST_4269_PI427708080AvailableAvailablecontig_44259 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g13130.1 +1 1e-161 491 382/530 (72%) 13102.m01454 protein KH domain-containing protein, putative, expressed
TAIR PP10 AT2G25970.1 +1 3e-79 271 193/324 (60%) KH domain-containing protein | chr2:11071844-11075604 REVERSE LENGTH=632