MLOC_60261 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.398842.30652.280472.3577
LEAShoots from the seedlings (10 cm shoot stage)1.455941.528281.645821.33207
INF1Young developing inflorescences (5mm)6.584746.28537.290125.46545
INF2Developing inflorescences (1-1.5 cm)5.636055.832326.34646.26512
ROORoots from the seedlings (10 cm shoot stage)0.9948052.353932.110072.55006
NODDeveloping tillers at six leaf stage, 3rd internode0.3717690.5659870.7528031.87914
CAR5Developing grain, bracts removed (5 DPA)2.459022.651052.822672.50183
CAR15Developing grain, bracts removed (15 DPA)0.7121990.8551750.4670311.60168



CDS Structure of MLOC_60261






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_60261.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_60261.1CUST_14101_PI427708080AvailableAvailablecontig_442323 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g56960.1 +3 0.0 717 399/526 (76%) 13103.m06236 protein PPR repeat domain containing protein, putative, expressed
TAIR PP10 AT5G14080.1 +3 1e-110 355 183/449 (41%) Tetratricopeptide repeat (TPR)-like superfamily protein | chr5:4543265-4545256 REVERSE LENGTH=634