MLOC_60230 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.841790.4774331.449631.20279
LEAShoots from the seedlings (10 cm shoot stage)1.135561.473860.7511171.05701
INF1Young developing inflorescences (5mm)1.179721.376591.696681.31624
INF2Developing inflorescences (1-1.5 cm)1.325871.666612.095722.05577
ROORoots from the seedlings (10 cm shoot stage)0.3154480.6742020.5051770.91551
NODDeveloping tillers at six leaf stage, 3rd internode0.3845581.013550.4716693.60965
CAR5Developing grain, bracts removed (5 DPA)1.146181.636982.166721.80919
CAR15Developing grain, bracts removed (15 DPA)0.989070.30159802.04598



CDS Structure of MLOC_60230






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_60230.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_60230.1CUST_8251_PI427708083AvailableAvailablecontig_442194 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g22260.1 +2 9e-50 170 93/114 (82%) 13105.m02251 protein crooked neck, putative, expressed
TAIR PP10 AT5G41770.1 +2 5e-26 103 55/107 (51%) crooked neck protein, putative / cell cycle protein, putative | chr5:16718021-16720936 FORWARD LENGTH=705