MLOC_60206 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.225083.615513.129083.9941
LEAShoots from the seedlings (10 cm shoot stage)1.571213.289549.996284.70065
INF1Young developing inflorescences (5mm)3.189433.81832.749363.02447
INF2Developing inflorescences (1-1.5 cm)2.490593.700132.559153.60632
ROORoots from the seedlings (10 cm shoot stage)6.142863.206013.23794.73292
NODDeveloping tillers at six leaf stage, 3rd internode1.138531.53441.220985.11963
CAR5Developing grain, bracts removed (5 DPA)2.923.621733.132633.51267
CAR15Developing grain, bracts removed (15 DPA)0.5361060.4524980.4288651.20327



CDS Structure of MLOC_60206






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_60206.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_60206.1CUST_14095_PI427708080AvailableAvailablecontig_442127 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g15570.1 -2 0.0 573 296/370 (80%) 13111.m01608 protein Ser/Thr protein phosphatase family protein, putative, expressed
TAIR PP10 AT1G18480.1 -2 2e-109 340 185/363 (51%) Calcineurin-like metallo-phosphoesterase superfamily protein | chr1:6361639-6362814 FORWARD LENGTH=391