- Predicted Gene MLOC_60199
MLOC_60199 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_60199_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_60199_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 2.86711 | 3.0945 | 3.21088 | 3.30347 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 1.26869 | 0.216084 | 0.0350456 | 0.41781 |
INF1 | Young developing inflorescences (5mm) | 17.8372 | 15.6599 | 13.366 | 14.7086 |
INF2 | Developing inflorescences (1-1.5 cm) | 15.7489 | 19.0834 | 15.7614 | 21.0775 |
ROO | Roots from the seedlings (10 cm shoot stage) | 2.40154 | 2.72032 | 2.93385 | 3.3429 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0.0951032 | 0.0309182 | 0.373065 |
CAR5 | Developing grain, bracts removed (5 DPA) | 1.72107 | 2.41945 | 2.41294 | 2.48535 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.180177 | 0.128899 | 0.16026 | 0.422155 |
CDS Structure of MLOC_60199
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_60199.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g09790.1 |
-1 |
3e-173 |
508 |
343/445 (77%) |
13101.m01047 protein IQ calmodulin-binding motif domain containing protein, expressed |
TAIR PP10 |
AT2G26180.1 |
-1 |
1e-73 |
248 |
212/409 (52%) |
| Symbols: IQD6 | IQ-domain 6 | chr2:11143433-11144982 REVERSE LENGTH=416 |