MLOC_60199 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.867113.09453.210883.30347
LEAShoots from the seedlings (10 cm shoot stage)1.268690.2160840.03504560.41781
INF1Young developing inflorescences (5mm)17.837215.659913.36614.7086
INF2Developing inflorescences (1-1.5 cm)15.748919.083415.761421.0775
ROORoots from the seedlings (10 cm shoot stage)2.401542.720322.933853.3429
NODDeveloping tillers at six leaf stage, 3rd internode00.09510320.03091820.373065
CAR5Developing grain, bracts removed (5 DPA)1.721072.419452.412942.48535
CAR15Developing grain, bracts removed (15 DPA)0.1801770.1288990.160260.422155



CDS Structure of MLOC_60199






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_60199.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK355725NoneNoneNoneNone
MLOC_60199.1CUST_4257_PI427708080AvailableAvailablecontig_44212 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g09790.1 -1 3e-173 508 343/445 (77%) 13101.m01047 protein IQ calmodulin-binding motif domain containing protein, expressed
TAIR PP10 AT2G26180.1 -1 1e-73 248 212/409 (52%) | Symbols: IQD6 | IQ-domain 6 | chr2:11143433-11144982 REVERSE LENGTH=416