- Predicted Gene MLOC_60196
MLOC_60196 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 125.08 | 85.8219 | 86.9336 | 95.1278 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 45.2072 | 25.1918 | 44.309 | 31.4253 |
| INF1 | Young developing inflorescences (5mm) | 147.467 | 150.571 | 150.214 | 126.394 |
| INF2 | Developing inflorescences (1-1.5 cm) | 77.4856 | 82.0846 | 95.0039 | 93.3182 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 87.2999 | 74.4657 | 81.725 | 89.4867 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 5.24028 | 4.29221 | 9.97027 | 15.9846 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 75.6711 | 81.8774 | 82.0059 | 80.8838 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 19.0874 | 19.1544 | 16.5678 | 44.4267 |
CDS Structure of MLOC_60196
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_60196.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g37862.1 |
+2 |
1e-114 |
338 |
188/238 (79%) |
13102.m04150 protein 60S ribosomal protein L6, putative, expressed |
| TAIR PP10 |
AT1G18540.1 |
+2 |
6e-81 |
251 |
135/234 (58%) |
Ribosomal protein L6 family protein | chr1:6377448-6378548 REVERSE LENGTH=233 |