MLOC_60157 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains104.04982.84687.91189.6894
LEAShoots from the seedlings (10 cm shoot stage)32.44249.9463418.547516.5386
INF1Young developing inflorescences (5mm)0.07326010.3179870.2156560.1996
INF2Developing inflorescences (1-1.5 cm)0.1951860.2597380.147090.261261
ROORoots from the seedlings (10 cm shoot stage)111.25675.342377.866688.3847
NODDeveloping tillers at six leaf stage, 3rd internode89.760972.15415.2065162.784
CAR5Developing grain, bracts removed (5 DPA)25.684335.259832.35334.4122
CAR15Developing grain, bracts removed (15 DPA)0.04399050.07718160.06360960.170141



CDS Structure of MLOC_60157






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_60157.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK251955.1NoneNoneNoneNone
MLOC_60157.3CUST_4253_PI427708080AvailableAvailablecontig_442040 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g02040.1 +2 1e-161 466 231/306 (75%) 13110.m00103 protein peroxidase precursor, putative, expressed
TAIR PP10 AT5G06730.1 +2 2e-111 338 178/326 (55%) Peroxidase superfamily protein | chr5:2080207-2081621 REVERSE LENGTH=358