- Predicted Gene MLOC_60149
MLOC_60149 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.0328999 | 0.13763 | 0.0436291 | 0.093433 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.103807 | 0.309237 | 0.216072 | 0.194914 |
| INF1 | Young developing inflorescences (5mm) | 0.0860377 | 0.287756 | 0.0364786 | 0.124827 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.0242664 | 0.131443 | 0.0338257 | 0.086858 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.660064 | 1.22854 | 0.99637 | 1.45818 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0.0284466 | 0.166485 | 0.259675 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.0860152 | 0.154884 | 0.0643727 | 0.106798 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.0319961 | 0.0325303 | 0 | 0.0986399 |
CDS Structure of MLOC_60149
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_60149.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g06570.2 |
+1 |
2e-159 |
470 |
275/468 (59%) |
13102.m00724 protein CAMK_KIN1/SNF1/Nim1_like.13 - CAMK includes calcium/calmodulin depedent protein kinases, expressed |
| TAIR PP10 |
AT5G07070.1 |
+1 |
7e-117 |
358 |
202/439 (46%) |
| Symbols: CIPK2, SnRK3.2 | CBL-interacting protein kinase 2 | chr5:2196743-2198113 REVERSE LENGTH=456 |