MLOC_60118 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.6241822.566317.749617.7251
LEAShoots from the seedlings (10 cm shoot stage)19.333919.247815.717616.3674
INF1Young developing inflorescences (5mm)66.275758.015952.568149.7488
INF2Developing inflorescences (1-1.5 cm)79.785461.966562.992475.5659
ROORoots from the seedlings (10 cm shoot stage)4.4460216.052111.301518.3424
NODDeveloping tillers at six leaf stage, 3rd internode0.970341.603072.741536.68168
CAR5Developing grain, bracts removed (5 DPA)35.278535.160235.620735.5177
CAR15Developing grain, bracts removed (15 DPA)16.115814.632912.615733.4638



CDS Structure of MLOC_60118






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_60118.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_60118.1CUST_14080_PI427708080AvailableAvailablecontig_441975 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g21530.1 +2 0.0 1230 751/910 (83%) 13103.m02580 protein AARP2CN domain containing protein, expressed
TAIR PP10 AT1G06720.1 +2 1e-161 508 269/378 (71%) P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr1:2060615-2067281 REVERSE LENGTH=1147