- Predicted Gene MLOC_60108
MLOC_60108 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 9.56137 | 14.8595 | 13.7033 | 12.4372 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 11.9513 | 15.1689 | 14.3151 | 10.9421 |
| INF1 | Young developing inflorescences (5mm) | 35.313 | 39.3363 | 41.7681 | 32.041 |
| INF2 | Developing inflorescences (1-1.5 cm) | 52.6208 | 46.9813 | 46.5318 | 51.6789 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 26.8852 | 27.9847 | 29.8913 | 30.5342 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 9.00563 | 13.4288 | 7.80261 | 35.4613 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 40.4216 | 37.0427 | 37.6498 | 35.6365 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 5.31864 | 4.62984 | 5.20688 | 11.7166 |
CDS Structure of MLOC_60108
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_60108.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os08g40150.2 |
+1 |
6e-117 |
365 |
265/374 (71%) |
13108.m04291 protein AT hook motif domain containing protein, expressed |
| TAIR PP10 |
AT2G33620.4 |
+1 |
9e-57 |
200 |
132/210 (63%) |
AT hook motif DNA-binding family protein | chr2:14234749-14236563 FORWARD LENGTH=351 |