- Predicted Gene MLOC_60101
MLOC_60101 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_60101_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_60101_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 29.9063 | 27.1908 | 26.2903 | 32.5206 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 11.9691 | 9.68741 | 8.6296 | 9.45975 |
INF1 | Young developing inflorescences (5mm) | 38.3088 | 38.3048 | 38.3738 | 36.9527 |
INF2 | Developing inflorescences (1-1.5 cm) | 33.1986 | 33.2727 | 32.5813 | 42.7314 |
ROO | Roots from the seedlings (10 cm shoot stage) | 17.8526 | 23.0318 | 23.7118 | 33.0429 |
NOD | Developing tillers at six leaf stage, 3rd internode | 2.10454 | 1.93989 | 2.88317 | 7.94689 |
CAR5 | Developing grain, bracts removed (5 DPA) | 26.2657 | 27.8734 | 27.5927 | 32.766 |
CAR15 | Developing grain, bracts removed (15 DPA) | 9.75632 | 8.02926 | 7.73535 | 23.2457 |
CDS Structure of MLOC_60101
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_60101.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os07g46440.1 |
-3 |
5e-161 |
473 |
267/394 (68%) |
13107.m04899 protein ribosomal protein, putative, expressed |
TAIR PP10 |
AT3G49080.1 |
-3 |
5e-109 |
338 |
170/264 (64%) |
Ribosomal protein S5 domain 2-like superfamily protein | chr3:18194500-18196657 REVERSE LENGTH=430 |