- Predicted Gene MLOC_60099
MLOC_60099 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_60099_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_60099_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 13.4639 | 9.51433 | 9.06524 | 10.2379 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 3.7579 | 1.51949 | 2.57339 | 2.35259 |
INF1 | Young developing inflorescences (5mm) | 30.0511 | 37.4048 | 39.0711 | 27.8953 |
INF2 | Developing inflorescences (1-1.5 cm) | 28.8258 | 25.807 | 26.2965 | 29.048 |
ROO | Roots from the seedlings (10 cm shoot stage) | 3.05396 | 9.86943 | 7.64139 | 10.3671 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.305196 | 0.261398 | 0.469449 | 1.05947 |
CAR5 | Developing grain, bracts removed (5 DPA) | 5.38672 | 6.14073 | 6.06379 | 5.69715 |
CAR15 | Developing grain, bracts removed (15 DPA) | 3.70337 | 2.71948 | 1.96502 | 6.61149 |
CDS Structure of MLOC_60099
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_60099.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os05g01910.1 |
-2 |
3e-75 |
253 |
128/138 (93%) |
13105.m00136 protein pumilio-family RNA binding protein, putative, expressed |
TAIR PP10 |
AT2G29140.1 |
-2 |
3e-62 |
216 |
105/132 (80%) |
| Symbols: APUM3, PUM3 | pumilio 3 | chr2:12531392-12535060 FORWARD LENGTH=964 |