MLOC_60090 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.063771.424151.186351.32334
LEAShoots from the seedlings (10 cm shoot stage)7.426219.2774212.57438.16327
INF1Young developing inflorescences (5mm)000.01749930.0134936
INF2Developing inflorescences (1-1.5 cm)000.05084230.0475745
ROORoots from the seedlings (10 cm shoot stage)1.080881.600650.7790661.71902
NODDeveloping tillers at six leaf stage, 3rd internode5.449063.551397.40113.0453
CAR5Developing grain, bracts removed (5 DPA)0.4721260.6720420.3655620.511096
CAR15Developing grain, bracts removed (15 DPA)4.444495.490114.0486211.628



CDS Structure of MLOC_60090






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_60090.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK353562NoneNoneNoneNone
MLOC_60090.1CUST_4243_PI427708080AvailableAvailablecontig_44182 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g33630.2 +2 0.0 1129 577/747 (77%) 13105.m03486 protein inosine-uridine preferring nucleoside hydrolase family protein, putative, expressed
TAIR PP10 AT5G18860.1 +2 0.0 889 483/863 (56%) inosine-uridine preferring nucleoside hydrolase family protein | chr5:6291023-6295581 FORWARD LENGTH=890