- Predicted Gene MLOC_60080
MLOC_60080 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_60080_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_60080_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 1.87494 | 1.62916 | 1.76295 | 1.31447 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 1.26665 | 0.77154 | 1.90067 | 0.866489 |
INF1 | Young developing inflorescences (5mm) | 4.82495 | 4.82178 | 5.1664 | 3.01268 |
INF2 | Developing inflorescences (1-1.5 cm) | 3.60312 | 3.64292 | 3.4631 | 2.9092 |
ROO | Roots from the seedlings (10 cm shoot stage) | 3.00414 | 1.68172 | 2.71168 | 1.78786 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.144118 | 0.0737009 | 0.357043 | 0.299222 |
CAR5 | Developing grain, bracts removed (5 DPA) | 2.46922 | 2.50233 | 2.6216 | 1.71473 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.772893 | 0.948412 | 1.18008 | 1.44586 |
CDS Structure of MLOC_60080
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_60080.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os05g30240.1 |
-3 |
1e-18 |
92 |
58/147 (39%) |
13105.m03084 protein PPR repeat domain containing protein, putative, expressed |
TAIR PP10 |
AT1G69620.1 |
-1 |
4e-12 |
59 |
29/42 (69%) |
| Symbols: RPL34 | ribosomal protein L34 | chr1:26189900-26191081 FORWARD LENGTH=119 |