MLOC_60079 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.04303800.05244140.068045
LEAShoots from the seedlings (10 cm shoot stage)0.12506500.1223960.119716
INF1Young developing inflorescences (5mm)0.1343850.10860.128130.111193
INF2Developing inflorescences (1-1.5 cm)0.1540560.2629570.1639840.247406
ROORoots from the seedlings (10 cm shoot stage)0.1464270.1252220.1148850.174395
NODDeveloping tillers at six leaf stage, 3rd internode0.08887240.08960570.3244910.443765
CAR5Developing grain, bracts removed (5 DPA)0.2308620.03522820.0403520.0957814
CAR15Developing grain, bracts removed (15 DPA)0.03530780.038059800.11999



CDS Structure of MLOC_60079






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_60079.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_60079.1CUST_14078_PI427708080AvailableAvailablecontig_44175 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g33910.1 +1 5e-157 453 246/389 (63%) 13108.m03543 protein no apical meristem protein, putative, expressed
TAIR PP10 AT1G26870.1 +1 2e-99 306 155/258 (60%) | Symbols: FEZ, ANAC009 | NAC (No Apical Meristem) domain transcriptional regulator superfamily protein | chr1:9312856-9314983 FORWARD LENGTH=425