- Predicted Gene MLOC_60079
MLOC_60079 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0.043038 | 0 | 0.0524414 | 0.068045 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.125065 | 0 | 0.122396 | 0.119716 |
INF1 | Young developing inflorescences (5mm) | 0.134385 | 0.1086 | 0.12813 | 0.111193 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.154056 | 0.262957 | 0.163984 | 0.247406 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.146427 | 0.125222 | 0.114885 | 0.174395 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.0888724 | 0.0896057 | 0.324491 | 0.443765 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.230862 | 0.0352282 | 0.040352 | 0.0957814 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.0353078 | 0.0380598 | 0 | 0.11999 |
CDS Structure of MLOC_60079
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_60079.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os08g33910.1 |
+1 |
5e-157 |
453 |
246/389 (63%) |
13108.m03543 protein no apical meristem protein, putative, expressed |
TAIR PP10 |
AT1G26870.1 |
+1 |
2e-99 |
306 |
155/258 (60%) |
| Symbols: FEZ, ANAC009 | NAC (No Apical Meristem) domain transcriptional regulator superfamily protein | chr1:9312856-9314983 FORWARD LENGTH=425 |