- Predicted Gene MLOC_60074
MLOC_60074 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 19.0142 | 15.1768 | 17.4164 | 18.2149 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 23.6189 | 24.1385 | 25.1205 | 21.9074 |
| INF1 | Young developing inflorescences (5mm) | 17.2856 | 19.5206 | 23.1847 | 17.8192 |
| INF2 | Developing inflorescences (1-1.5 cm) | 29.7232 | 24.3474 | 28.8858 | 32.2011 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 31.3627 | 24.702 | 24.8652 | 34.2164 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 19.807 | 25.3879 | 39.7945 | 98.6794 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 16.4653 | 15.1615 | 17.5379 | 17.4671 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 7.53946 | 6.56711 | 8.03593 | 18.0329 |
CDS Structure of MLOC_60074
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_60074.6
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os09g12770.1 |
+1 |
1e-121 |
363 |
229/289 (79%) |
13109.m01166 protein Myb-like DNA-binding domain containing protein, putative, expressed |
| TAIR PP10 |
AT2G01060.1 |
+1 |
1e-58 |
198 |
148/243 (61%) |
myb-like HTH transcriptional regulator family protein | chr2:73456-74902 REVERSE LENGTH=286 |
