- Predicted Gene MLOC_60073
MLOC_60073 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_60073_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_60073_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 7.88696 | 10.4483 | 10.5056 | 10.5867 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 612.448 | 1091.96 | 1410.4 | 837.405 |
INF1 | Young developing inflorescences (5mm) | 22.0284 | 22.037 | 31.5905 | 24.3136 |
INF2 | Developing inflorescences (1-1.5 cm) | 20.7488 | 21.1338 | 27.3136 | 27.8051 |
ROO | Roots from the seedlings (10 cm shoot stage) | 2.87046 | 5.47881 | 13.0544 | 7.3011 |
NOD | Developing tillers at six leaf stage, 3rd internode | 590.743 | 1139.76 | 1576.6 | 3156.64 |
CAR5 | Developing grain, bracts removed (5 DPA) | 150 | 159.018 | 146.284 | 168.038 |
CAR15 | Developing grain, bracts removed (15 DPA) | 29.9008 | 38.2235 | 33.4419 | 94.0835 |
CDS Structure of MLOC_60073
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_60073.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os07g38960.1 |
-3 |
6e-161 |
457 |
215/245 (88%) |
13107.m04032 protein chlorophyll A-B binding protein, putative, expressed |
TAIR PP10 |
AT3G61470.1 |
-3 |
4e-147 |
421 |
197/223 (88%) |
| Symbols: LHCA2 | photosystem I light harvesting complex gene 2 | chr3:22745736-22747032 FORWARD LENGTH=257 |