MLOC_60070 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.2273641.594131.701571.54852
LEAShoots from the seedlings (10 cm shoot stage)2.618732.517831.025111.90618
INF1Young developing inflorescences (5mm)2.205683.121463.443782.95352
INF2Developing inflorescences (1-1.5 cm)10.9495.785114.760379.01658
ROORoots from the seedlings (10 cm shoot stage)01.103120.5799991.26246
NODDeveloping tillers at six leaf stage, 3rd internode0.4337221.536011.130165.11666
CAR5Developing grain, bracts removed (5 DPA)2.441472.076921.850742.43793
CAR15Developing grain, bracts removed (15 DPA)0.3321721.277481.981483.18784



CDS Structure of MLOC_60070






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_60070.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_60070.1CUST_14077_PI427708080AvailableAvailablecontig_44166 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g30780.1 +3 1e-14 68 36/81 (44%) 13112.m03136 protein retrotransposon protein, putative, unclassified
TAIR PP10None-----