MLOC_60063 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains27.275337.925436.649243.5411
LEAShoots from the seedlings (10 cm shoot stage)45.67712.458614.938822.731
INF1Young developing inflorescences (5mm)38.301138.014536.038537.0369
INF2Developing inflorescences (1-1.5 cm)54.378260.993951.391775.2401
ROORoots from the seedlings (10 cm shoot stage)9.3116323.718715.430734.2875
NODDeveloping tillers at six leaf stage, 3rd internode48.096553.78532.4567212.122
CAR5Developing grain, bracts removed (5 DPA)43.081644.644141.5753.1296
CAR15Developing grain, bracts removed (15 DPA)8.097957.595527.4006221.124



CDS Structure of MLOC_60063






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_60063.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK354595NoneNoneNoneNone
MLOC_60063.1CUST_4238_PI427708080AvailableAvailablecontig_44162 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g50204.1 -3 2e-177 543 384/647 (59%) 13104.m05141 protein protein transport protein-related, putative, expressed
TAIR PP10 AT5G16730.1 -3 3e-77 273 198/574 (34%) Plant protein of unknown function (DUF827) | chr5:5497890-5500775 FORWARD LENGTH=853