MLOC_60052 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.239511.305850.6835461.29312
LEAShoots from the seedlings (10 cm shoot stage)3.336141.697243.335242.25681
INF1Young developing inflorescences (5mm)3.586454.703734.021854.5166
INF2Developing inflorescences (1-1.5 cm)5.077437.425214.611258.50234
ROORoots from the seedlings (10 cm shoot stage)1.633282.237260.8617342.71591
NODDeveloping tillers at six leaf stage, 3rd internode3.44426.7682811.294622.4559
CAR5Developing grain, bracts removed (5 DPA)3.875344.654472.576444.7926
CAR15Developing grain, bracts removed (15 DPA)0.8847331.309991.753693.94072



CDS Structure of MLOC_60052






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_60052.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_60052.1CUST_8228_PI427708083AvailableAvailablecontig_441524 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g13840.1 +1 6e-11 60 28/37 (76%) 13102.m01539 protein citrate synthase, putative, expressed
TAIR PP10None-----