MLOC_60041 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains65.427457.993755.057458.4869
LEAShoots from the seedlings (10 cm shoot stage)45.020228.451543.756632.0278
INF1Young developing inflorescences (5mm)18.883416.868112.19313.589
INF2Developing inflorescences (1-1.5 cm)12.430814.287812.610114.0901
ROORoots from the seedlings (10 cm shoot stage)90.311744.750436.353357.3771
NODDeveloping tillers at six leaf stage, 3rd internode31.599432.222725.095488.4287
CAR5Developing grain, bracts removed (5 DPA)62.434847.80734.756146.0564
CAR15Developing grain, bracts removed (15 DPA)13.045214.091514.352632.0619



CDS Structure of MLOC_60041






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_60041.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK362897NoneNoneNoneNone
MLOC_60041.3CUST_4235_PI427708080AvailableAvailablecontig_441456 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g39260.1 +2 0.0 608 309/333 (93%) 13106.m04069 protein solute carrier family 35 member B1, putative, expressed
TAIR PP10 AT1G14360.1 +2 5e-170 487 247/329 (75%) | Symbols: ATUTR3, UTR3 | UDP-galactose transporter 3 | chr1:4911362-4913029 REVERSE LENGTH=331