MLOC_60038 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.317952.357812.88492.42877
LEAShoots from the seedlings (10 cm shoot stage)10.07446.5297611.14227.55432
INF1Young developing inflorescences (5mm)0.1472880.1716020.2763730.181616
INF2Developing inflorescences (1-1.5 cm)0.09827180.03715620.0232360.0660582
ROORoots from the seedlings (10 cm shoot stage)8.279926.556876.699567.67129
NODDeveloping tillers at six leaf stage, 3rd internode21.394735.050357.57116.578
CAR5Developing grain, bracts removed (5 DPA)0.5221240.4472550.3634070.455468
CAR15Developing grain, bracts removed (15 DPA)0.2816340.1947180.2365250.601384



CDS Structure of MLOC_60038






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_60038.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK358913NoneNoneNoneNone
MLOC_60038.2CUST_4234_PI427708080AvailableAvailablecontig_441389 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g38650.1 -2 5e-179 524 292/480 (61%) 13111.m03800 protein UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed
TAIR PP10 AT4G01070.1 -2 4e-136 412 228/471 (48%) | Symbols: GT72B1, UGT72B1 | UDP-Glycosyltransferase superfamily protein | chr4:461858-463300 REVERSE LENGTH=480