- Predicted Gene MLOC_60006
MLOC_60006 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_60006_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_60006_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 0.985741 | 3.14227 | 4.0751 | 2.75912 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 2.89997 | 1.95864 | 1.7381 | 1.92214 |
INF1 | Young developing inflorescences (5mm) | 6.2232 | 3.77329 | 3.63619 | 3.89701 |
INF2 | Developing inflorescences (1-1.5 cm) | 4.29066 | 4.26515 | 3.9926 | 4.55773 |
ROO | Roots from the seedlings (10 cm shoot stage) | 1.04182 | 2.19069 | 3.13519 | 2.58756 |
NOD | Developing tillers at six leaf stage, 3rd internode | 2.04789 | 1.3794 | 1.15553 | 4.68591 |
CAR5 | Developing grain, bracts removed (5 DPA) | 5.38897 | 4.98589 | 5.01067 | 4.8429 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.53763 | 1.23156 | 1.41484 | 3.12309 |
CDS Structure of MLOC_60006
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_60006.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os08g12820.1 |
+2 |
0.0 |
1495 |
796/1003 (79%) |
13108.m01368 protein proteasome/cyclosome repeat containing protein, expressed |
TAIR PP10 |
AT2G32730.1 |
+2 |
0.0 |
1362 |
739/1014 (73%) |
26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit | chr2:13880189-13885464 FORWARD LENGTH=1004 |