- Predicted Gene MLOC_59994
MLOC_59994 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0.968792 | 0.288591 | 0.244537 | 0.466855 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.0960863 | 0 | 0.116291 | 0.0976301 |
INF1 | Young developing inflorescences (5mm) | 0.093774 | 0.093792 | 0.0399474 | 0.0782473 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.347177 | 0.0661548 | 0.122839 | 0.216526 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.188772 | 0.100463 | 0.106892 | 0.153523 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.121207 | 0 | 0.0470794 | 0.0379594 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.569807 | 0.870726 | 0.811736 | 0.973876 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1540.93 | 1333.82 | 1401.37 | 4052.19 |
CDS Structure of MLOC_59994
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_59994.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g46100.1 |
-2 |
2e-135 |
410 |
269/474 (57%) |
13103.m04955 protein cupin domain containing protein, expressed |
TAIR PP10 |
AT3G22640.1 |
-2 |
5e-35 |
138 |
119/425 (28%) |
| Symbols: PAP85 | cupin family protein | chr3:8011902-8013883 REVERSE LENGTH=486 |