- Predicted Gene MLOC_59970
MLOC_59970 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.377838 | 0.300912 | 0.586102 | 0.387395 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0.186274 | 0.351382 | 0 | 0.236474 |
| INF1 | Young developing inflorescences (5mm) | 0.325171 | 0.356028 | 0.420071 | 0.305251 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.31622 | 0.250699 | 0.335085 | 0.326458 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.219381 | 0.249077 | 0.115643 | 0.28353 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.0603727 | 0.240406 | 0.579955 | 0.964526 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 35.6105 | 36.6658 | 38.6028 | 37.0125 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 49.2384 | 54.0311 | 42.0454 | 112.278 |
CDS Structure of MLOC_59970
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_59970.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g49150.3 |
-3 |
4e-75 |
239 |
129/213 (61%) |
13102.m05562 protein RNA polymerase Rpb4, putative, expressed |
| TAIR PP10 |
AT4G15950.1 |
-3 |
2e-27 |
109 |
51/122 (42%) |
| Symbols: NRPD4, NRPE4, RDM2 | RNA polymerase II, Rpb4, core protein | chr4:9040743-9041994 FORWARD LENGTH=205 |