MLOC_59969 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.7998570.8327530.784710.882635
LEAShoots from the seedlings (10 cm shoot stage)0.8664792.638211.945061.65286
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0.05307850.02515270.6619150.234378
ROORoots from the seedlings (10 cm shoot stage)1.637770.8435870.9971511.19656
NODDeveloping tillers at six leaf stage, 3rd internode00.5020260.009037492.10382
CAR5Developing grain, bracts removed (5 DPA)0.6327210.6814890.7378820.766375
CAR15Developing grain, bracts removed (15 DPA)27.200329.374126.222872.2979



CDS Structure of MLOC_59969






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_59969.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK365852NoneNoneNoneNone
MLOC_59969.3CUST_4223_PI427708080AvailableAvailablecontig_44073 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g48300.1 -1 9e-170 485 248/287 (86%) 13106.m05135 protein protein phosphatase 2C, putative, expressed
TAIR PP10 AT4G31750.1 -1 1e-153 443 218/267 (82%) | Symbols: WIN2 | HOPW1-1-interacting 2 | chr4:15364657-15367207 REVERSE LENGTH=311