- Predicted Gene MLOC_59969
MLOC_59969 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0.799857 | 0.832753 | 0.78471 | 0.882635 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.866479 | 2.63821 | 1.94506 | 1.65286 |
INF1 | Young developing inflorescences (5mm) | 0 | 0 | 0 | 0 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.0530785 | 0.0251527 | 0.661915 | 0.234378 |
ROO | Roots from the seedlings (10 cm shoot stage) | 1.63777 | 0.843587 | 0.997151 | 1.19656 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0.502026 | 0.00903749 | 2.10382 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.632721 | 0.681489 | 0.737882 | 0.766375 |
CAR15 | Developing grain, bracts removed (15 DPA) | 27.2003 | 29.3741 | 26.2228 | 72.2979 |
CDS Structure of MLOC_59969
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_59969.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g48300.1 |
-1 |
9e-170 |
485 |
248/287 (86%) |
13106.m05135 protein protein phosphatase 2C, putative, expressed |
TAIR PP10 |
AT4G31750.1 |
-1 |
1e-153 |
443 |
218/267 (82%) |
| Symbols: WIN2 | HOPW1-1-interacting 2 | chr4:15364657-15367207 REVERSE LENGTH=311 |