MLOC_59953 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains24.257616.259722.500417.297
LEAShoots from the seedlings (10 cm shoot stage)19.216820.033829.145816.8417
INF1Young developing inflorescences (5mm)18.856222.4532.885816.5292
INF2Developing inflorescences (1-1.5 cm)23.953818.188923.459319.9356
ROORoots from the seedlings (10 cm shoot stage)22.236428.06528.454426.988
NODDeveloping tillers at six leaf stage, 3rd internode27.543631.378543.138195.7336
CAR5Developing grain, bracts removed (5 DPA)12.786813.482613.909110.6929
CAR15Developing grain, bracts removed (15 DPA)12.676312.913812.504924.2153



CDS Structure of MLOC_59953






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_59953.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_59953.1CUST_8214_PI427708083AvailableAvailablecontig_44062 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g08120.1 -2 5e-90 290 146/201 (73%) 13102.m00934 protein calmodulin binding protein, putative, expressed
TAIR PP10 AT5G57580.1 -2 2e-30 124 80/203 (39%) Calmodulin-binding protein | chr5:23314994-23317683 REVERSE LENGTH=647