- Predicted Gene MLOC_59925
MLOC_59925 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 7.43764 | 5.13816 | 5.07669 | 4.49492 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 34.3509 | 86.6218 | 46.8915 | 33.2074 |
| INF1 | Young developing inflorescences (5mm) | 0.532946 | 0.788368 | 0.48925 | 0.372598 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.867511 | 1.16628 | 1.21318 | 0.855051 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 6.10687 | 8.12207 | 6.73896 | 6.56917 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 5.32134 | 9.56628 | 27.2272 | 29.346 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 5.75061 | 7.5146 | 6.64835 | 4.47222 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.662925 | 1.1545 | 0.906378 | 1.4113 |
CDS Structure of MLOC_59925
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_59925.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g37910.2 |
+3 |
6e-26 |
111 |
51/60 (85%) |
13101.m03866 protein vacuolar-processing enzyme precursor, putative, expressed |
| TAIR PP10 |
AT4G32940.1 |
+3 |
1e-19 |
93 |
41/61 (67%) |
| Symbols: GAMMA-VPE, GAMMAVPE | gamma vacuolar processing enzyme | chr4:15900557-15903161 REVERSE LENGTH=494 |