MLOC_59924 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.118255.052265.063685.42907
LEAShoots from the seedlings (10 cm shoot stage)155.528333.927380.048255.387
INF1Young developing inflorescences (5mm)4.761183.194652.56793.25528
INF2Developing inflorescences (1-1.5 cm)2.787933.078264.045343.95777
ROORoots from the seedlings (10 cm shoot stage)0.4751950.8470251.72971.19398
NODDeveloping tillers at six leaf stage, 3rd internode51.220758.340173.4982186.423
CAR5Developing grain, bracts removed (5 DPA)58.666870.342563.355872.2632
CAR15Developing grain, bracts removed (15 DPA)5.911047.40196.256217.7888



CDS Structure of MLOC_59924






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_59924.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK250502.1NoneNoneNoneNone
MLOC_59924.2CUST_4215_PI427708080AvailableAvailablecontig_44041 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g16680.1 +3 0.0 706 348/369 (94%) 13104.m01508 protein fructose-1,6-bisphosphatase, putative, expressed
TAIR PP10 AT3G55800.1 +3 0.0 575 295/369 (80%) | Symbols: SBPASE | sedoheptulose-bisphosphatase | chr3:20709640-20711421 FORWARD LENGTH=393