MLOC_59923 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains11.527610.06729.0693511.8722
LEAShoots from the seedlings (10 cm shoot stage)7.807465.904815.371025.92993
INF1Young developing inflorescences (5mm)10.075311.859511.976510.5226
INF2Developing inflorescences (1-1.5 cm)11.604313.246211.182314.9485
ROORoots from the seedlings (10 cm shoot stage)9.639329.507938.030413.327
NODDeveloping tillers at six leaf stage, 3rd internode6.124659.8773410.319836.3998
CAR5Developing grain, bracts removed (5 DPA)8.916849.352089.2512310.1738
CAR15Developing grain, bracts removed (15 DPA)6.355586.436524.9249615.8826



CDS Structure of MLOC_59923






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_59923.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_59923.1CUST_14056_PI427708080AvailableAvailablecontig_44041 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g63354.1 +3 3e-145 428 246/363 (68%) 13101.m06798 protein ELM2 domain containing protein, putative, expressed
TAIR PP10 AT5G04110.1 +3 2e-28 118 60/165 (36%) | Symbols: GYRB3 | DNA GYRASE B3 | chr5:1110757-1114112 REVERSE LENGTH=546