- Predicted Gene MLOC_59921
MLOC_59921 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_59921_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_59921_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 29.4321 | 45.0894 | 46.4987 | 44.7828 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 53.3878 | 48.9642 | 47.0294 | 43.9628 |
INF1 | Young developing inflorescences (5mm) | 32.1074 | 32.689 | 29.048 | 28.1634 |
INF2 | Developing inflorescences (1-1.5 cm) | 40.334 | 38.0455 | 36.9447 | 43.8636 |
ROO | Roots from the seedlings (10 cm shoot stage) | 33.4808 | 49.9123 | 42.4844 | 59.5594 |
NOD | Developing tillers at six leaf stage, 3rd internode | 39.8138 | 36.7493 | 35.6364 | 124.316 |
CAR5 | Developing grain, bracts removed (5 DPA) | 40.362 | 36.5915 | 35.5615 | 38.1742 |
CAR15 | Developing grain, bracts removed (15 DPA) | 10.0813 | 8.88557 | 10.5703 | 23.8394 |
CDS Structure of MLOC_59921
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_59921.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os12g07230.1 |
+3 |
0.0 |
930 |
474/523 (91%) |
13112.m00754 protein CAMK_CAMK_like.45 - CAMK includes calcium/calmodulin depedent protein kinases, expressed |
TAIR PP10 |
AT1G35670.1 |
+3 |
0.0 |
746 |
358/462 (77%) |
| Symbols: ATCDPK2, CPK11, ATCPK11, CDPK2 | calcium-dependent protein kinase 2 | chr1:13205456-13208058 FORWARD LENGTH=495 |