MLOC_59921 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains29.432145.089446.498744.7828
LEAShoots from the seedlings (10 cm shoot stage)53.387848.964247.029443.9628
INF1Young developing inflorescences (5mm)32.107432.68929.04828.1634
INF2Developing inflorescences (1-1.5 cm)40.33438.045536.944743.8636
ROORoots from the seedlings (10 cm shoot stage)33.480849.912342.484459.5594
NODDeveloping tillers at six leaf stage, 3rd internode39.813836.749335.6364124.316
CAR5Developing grain, bracts removed (5 DPA)40.36236.591535.561538.1742
CAR15Developing grain, bracts removed (15 DPA)10.08138.8855710.570323.8394



CDS Structure of MLOC_59921






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_59921.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_59921.1CUST_14055_PI427708080AvailableAvailablecontig_44036 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g07230.1 +3 0.0 930 474/523 (91%) 13112.m00754 protein CAMK_CAMK_like.45 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
TAIR PP10 AT1G35670.1 +3 0.0 746 358/462 (77%) | Symbols: ATCDPK2, CPK11, ATCPK11, CDPK2 | calcium-dependent protein kinase 2 | chr1:13205456-13208058 FORWARD LENGTH=495