- Predicted Gene MLOC_59910
MLOC_59910 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 13.229 | 15.6705 | 18.5621 | 17.4402 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 8.22135 | 9.85103 | 9.06911 | 8.37124 |
| INF1 | Young developing inflorescences (5mm) | 18.6734 | 19.8545 | 19.9567 | 17.7555 |
| INF2 | Developing inflorescences (1-1.5 cm) | 19.6689 | 20.5732 | 21.552 | 22.9139 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 16.3648 | 15.6138 | 21.6081 | 22.6815 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 7.00221 | 4.31832 | 3.80408 | 14.8265 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 7.5662 | 7.18565 | 7.4372 | 7.57053 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.75671 | 1.33156 | 1.7087 | 3.905 |
CDS Structure of MLOC_59910
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_59910.5
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os07g44730.1 |
+3 |
3e-137 |
395 |
193/226 (85%) |
13107.m04708 protein expressed protein |
| TAIR PP10 |
AT2G26810.2 |
+3 |
2e-93 |
282 |
138/229 (60%) |
Putative methyltransferase family protein | chr2:11433900-11436078 REVERSE LENGTH=256 |
