MLOC_59909 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains250.278200.042194.23205.407
LEAShoots from the seedlings (10 cm shoot stage)99.36259.643452.224156.3879
INF1Young developing inflorescences (5mm)166.661176.609165.073139.077
INF2Developing inflorescences (1-1.5 cm)119.275128.178131.804132.959
ROORoots from the seedlings (10 cm shoot stage)118.015144.704211.132162.642
NODDeveloping tillers at six leaf stage, 3rd internode8.357824.416976.2447313.6116
CAR5Developing grain, bracts removed (5 DPA)110.38117.862112.865107.838
CAR15Developing grain, bracts removed (15 DPA)15.085115.793413.719735.2392



CDS Structure of MLOC_59909






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_59909.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK252009.1NoneNoneNoneNone
MLOC_59909.1NoneAvailableAvailablecontig_44025 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g44740.1 +2 2e-42 149 75/83 (90%) 13107.m04709 protein chaperonin, putative, expressed
TAIR PP10 AT1G14980.1 +2 2e-32 120 57/83 (69%) | Symbols: CPN10 | chaperonin 10 | chr1:5165930-5166654 REVERSE LENGTH=98