- Predicted Gene MLOC_59888
MLOC_59888 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 16.9956 | 15.7143 | 14.4156 | 16.7343 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 17.0036 | 17.6945 | 19.177 | 15.0142 |
| INF1 | Young developing inflorescences (5mm) | 12.2544 | 15.6629 | 16.6334 | 13.8589 |
| INF2 | Developing inflorescences (1-1.5 cm) | 16.4327 | 16.3329 | 18.0855 | 20.1308 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 26.8929 | 23.7016 | 26.4048 | 29.5743 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 24.6435 | 37.006 | 51.9329 | 123.974 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 35.0146 | 37.6588 | 35.9944 | 39.2802 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 64.3896 | 63.8657 | 51.5424 | 160.326 |
CDS Structure of MLOC_59888
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_59888.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g02560.1 |
-3 |
3e-148 |
439 |
222/350 (63%) |
13103.m00218 protein cyclin-like F-box, putative, expressed |
| TAIR PP10 |
AT4G00755.2 |
-3 |
2e-75 |
248 |
145/357 (41%) |
F-box family protein | chr4:325294-326787 FORWARD LENGTH=377 |