- Predicted Gene MLOC_59872
MLOC_59872 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_59872_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_59872_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 19.2615 | 12.0215 | 14.0437 | 13.5632 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 11.1543 | 11.251 | 18.5533 | 10.4526 |
INF1 | Young developing inflorescences (5mm) | 25.9753 | 28.9728 | 31.4201 | 24.4765 |
INF2 | Developing inflorescences (1-1.5 cm) | 24.0121 | 24.1727 | 24.0854 | 26.053 |
ROO | Roots from the seedlings (10 cm shoot stage) | 31.8582 | 20.2718 | 17.9408 | 23.016 |
NOD | Developing tillers at six leaf stage, 3rd internode | 5.12056 | 8.69038 | 15.2634 | 26.471 |
CAR5 | Developing grain, bracts removed (5 DPA) | 18.8251 | 18.2183 | 15.9759 | 17.0753 |
CAR15 | Developing grain, bracts removed (15 DPA) | 4.01678 | 3.3052 | 3.84489 | 8.84143 |
CDS Structure of MLOC_59872
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_59872.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g57370.1 |
+2 |
2e-145 |
419 |
225/266 (85%) |
13104.m06000 protein acyl-protein thioesterase, putative, expressed |
TAIR PP10 |
AT4G22300.1 |
+2 |
5e-114 |
337 |
151/211 (72%) |
| Symbols: SOBER1 | carboxylesterases | chr4:11787560-11789252 REVERSE LENGTH=262 |