- Predicted Gene MLOC_59871
MLOC_59871 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0.674843 | 0.524661 | 0.552311 | 0.574277 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.193321 | 0.148572 | 0.334343 | 0.192287 |
INF1 | Young developing inflorescences (5mm) | 1.27474 | 1.43485 | 1.48589 | 1.23774 |
INF2 | Developing inflorescences (1-1.5 cm) | 1.59634 | 1.54907 | 2.00225 | 1.87905 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.896152 | 0.875248 | 0.227069 | 0.939301 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.144168 | 0.18845 | 0.325686 | 0.665171 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.549798 | 0.994578 | 0.990537 | 0.868362 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.317923 | 0.435399 | 0.551952 | 1.02711 |
CDS Structure of MLOC_59871
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_59871.6
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g57380.1 |
+2 |
3e-109 |
326 |
161/219 (74%) |
13104.m06001 protein acyl-protein thioesterase, putative, expressed |
TAIR PP10 |
AT4G22300.1 |
+2 |
6e-63 |
207 |
101/212 (48%) |
| Symbols: SOBER1 | carboxylesterases | chr4:11787560-11789252 REVERSE LENGTH=262 |