MLOC_59869 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains14.860314.203213.902315.2149
LEAShoots from the seedlings (10 cm shoot stage)6.881746.457427.68595.94045
INF1Young developing inflorescences (5mm)8.004457.749137.539176.92737
INF2Developing inflorescences (1-1.5 cm)7.549326.883367.321957.97183
ROORoots from the seedlings (10 cm shoot stage)16.390713.610114.739216.9193
NODDeveloping tillers at six leaf stage, 3rd internode9.6407610.98568.8101230.1578
CAR5Developing grain, bracts removed (5 DPA)7.401797.705467.125167.29738
CAR15Developing grain, bracts removed (15 DPA)2.783872.796462.454456.60293



CDS Structure of MLOC_59869






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_59869.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK362079NoneNoneNoneNone
MLOC_59869.1CUST_4206_PI427708080AvailableAvailablecontig_43980 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g10340.1 -1 9e-143 425 206/248 (83%) 13101.m01114 protein expressed protein
TAIR PP10 AT5G11640.1 -1 2e-68 229 119/243 (49%) Thioredoxin superfamily protein | chr5:3742008-3743703 FORWARD LENGTH=253