- Predicted Gene MLOC_59869
MLOC_59869 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 14.8603 | 14.2032 | 13.9023 | 15.2149 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 6.88174 | 6.45742 | 7.6859 | 5.94045 |
INF1 | Young developing inflorescences (5mm) | 8.00445 | 7.74913 | 7.53917 | 6.92737 |
INF2 | Developing inflorescences (1-1.5 cm) | 7.54932 | 6.88336 | 7.32195 | 7.97183 |
ROO | Roots from the seedlings (10 cm shoot stage) | 16.3907 | 13.6101 | 14.7392 | 16.9193 |
NOD | Developing tillers at six leaf stage, 3rd internode | 9.64076 | 10.9856 | 8.81012 | 30.1578 |
CAR5 | Developing grain, bracts removed (5 DPA) | 7.40179 | 7.70546 | 7.12516 | 7.29738 |
CAR15 | Developing grain, bracts removed (15 DPA) | 2.78387 | 2.79646 | 2.45445 | 6.60293 |
CDS Structure of MLOC_59869
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_59869.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g10340.1 |
-1 |
9e-143 |
425 |
206/248 (83%) |
13101.m01114 protein expressed protein |
TAIR PP10 |
AT5G11640.1 |
-1 |
2e-68 |
229 |
119/243 (49%) |
Thioredoxin superfamily protein | chr5:3742008-3743703 FORWARD LENGTH=253 |