- Predicted Gene MLOC_59862
MLOC_59862 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_59862_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_59862_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 20.2034 | 14.0886 | 16.9055 | 18.244 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 2.90243 | 0.565914 | 0.631135 | 1.14903 |
INF1 | Young developing inflorescences (5mm) | 0.390752 | 0.559363 | 0.47514 | 0.482242 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.873532 | 0.573359 | 0.339025 | 0.781571 |
ROO | Roots from the seedlings (10 cm shoot stage) | 37.3254 | 25.0023 | 38.3383 | 37.3993 |
NOD | Developing tillers at six leaf stage, 3rd internode | 12.933 | 14.3824 | 1.28125 | 33.6792 |
CAR5 | Developing grain, bracts removed (5 DPA) | 9.55577 | 8.86691 | 8.3058 | 10.5329 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.342693 | 0.585415 | 0.299614 | 1.27947 |
CDS Structure of MLOC_59862
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_59862.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os12g40890.1 |
-3 |
2e-96 |
293 |
181/279 (65%) |
13112.m04260 protein OsIAA30 - Auxin-responsive Aux/IAA gene family member, expressed |
TAIR PP10 |
AT3G04730.1 |
-3 |
8e-76 |
238 |
139/271 (51%) |
| Symbols: IAA16 | indoleacetic acid-induced protein 16 | chr3:1288993-1290415 REVERSE LENGTH=236 |