MLOC_59849 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains20.766618.083316.080820.9655
LEAShoots from the seedlings (10 cm shoot stage)13.315313.424517.033914.7473
INF1Young developing inflorescences (5mm)51.85852.622861.320352.9232
INF2Developing inflorescences (1-1.5 cm)72.703363.167671.321183.8496
ROORoots from the seedlings (10 cm shoot stage)25.836924.981726.318937.9434
NODDeveloping tillers at six leaf stage, 3rd internode6.9378810.975118.412749.9306
CAR5Developing grain, bracts removed (5 DPA)26.048825.775425.400129.1684
CAR15Developing grain, bracts removed (15 DPA)49.117643.460141.8185116.765



CDS Structure of MLOC_59849






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_59849.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK373901NoneNoneNoneNone
MLOC_59849.1CUST_4204_PI427708080AvailableAvailablecontig_43967 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g47840.1 +1 0.0 608 343/403 (85%) 13106.m05080 protein ZOS6-08 - C2H2 zinc finger protein, expressed
TAIR PP10 AT4G31420.1 +1 9e-151 443 250/414 (60%) Zinc finger protein 622 | chr4:15245987-15247763 REVERSE LENGTH=404