MLOC_59848 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.616576.067566.57746.77386
LEAShoots from the seedlings (10 cm shoot stage)6.6374210.07228.958387.66558
INF1Young developing inflorescences (5mm)5.721467.285659.101476.4433
INF2Developing inflorescences (1-1.5 cm)9.378897.204919.740489.55111
ROORoots from the seedlings (10 cm shoot stage)25.562819.020617.291125.4816
NODDeveloping tillers at six leaf stage, 3rd internode8.2230212.034112.349540.007
CAR5Developing grain, bracts removed (5 DPA)4.127915.158474.095474.5471
CAR15Developing grain, bracts removed (15 DPA)10.967210.95539.5212225.3878



CDS Structure of MLOC_59848






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_59848.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK354104NoneNoneNoneNone
MLOC_59848.1CUST_4203_PI427708080AvailableAvailablecontig_43967 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g47860.2 -2 0.0 529 278/316 (88%) 13106.m05083 protein expressed protein
TAIR PP10 AT4G31410.2 -2 1e-69 233 147/296 (50%) Protein of unknown function (DUF1644) | chr4:15244259-15245474 FORWARD LENGTH=308