MLOC_59843 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.08136120.1815920.1436580.190867
LEAShoots from the seedlings (10 cm shoot stage)000.03306760.0363552
INF1Young developing inflorescences (5mm)00.01641790.03545370.0463335
INF2Developing inflorescences (1-1.5 cm)0.01523840.02920230.01826340.0313767
ROORoots from the seedlings (10 cm shoot stage)0.08006420.02151020.1908690.0688223
NODDeveloping tillers at six leaf stage, 3rd internode000.005395370.0147659
CAR5Developing grain, bracts removed (5 DPA)000.01732020.0229183
CAR15Developing grain, bracts removed (15 DPA)0.012826100.03706730.0817433



CDS Structure of MLOC_59843






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_59843.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK376572NoneNoneNoneNone
MLOC_59843.1CUST_4199_PI427708080AvailableAvailablecontig_43963 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g51600.1 +2 0.0 882 458/598 (77%) 13102.m05871 protein endonuclease/exonuclease/phosphatase family domain containing protein, expressed
TAIR PP10 AT5G65090.1 +2 0.0 578 304/517 (59%) | Symbols: MRH3, BST1, DER4 | DNAse I-like superfamily protein | chr5:26004282-26006656 FORWARD LENGTH=529