- Predicted Gene MLOC_59842
MLOC_59842 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 30.3243 | 36.2539 | 33.4556 | 36.0085 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 34.5656 | 35.3324 | 23.7838 | 29.5708 |
INF1 | Young developing inflorescences (5mm) | 40.2186 | 41.4617 | 47.2715 | 36.3224 |
INF2 | Developing inflorescences (1-1.5 cm) | 50.7673 | 45.8846 | 50.4952 | 55.0565 |
ROO | Roots from the seedlings (10 cm shoot stage) | 18.7025 | 29.1289 | 26.5058 | 38.8781 |
NOD | Developing tillers at six leaf stage, 3rd internode | 38.074 | 33.353 | 41.2736 | 145.635 |
CAR5 | Developing grain, bracts removed (5 DPA) | 27.8473 | 26.2644 | 25.6093 | 27.4348 |
CAR15 | Developing grain, bracts removed (15 DPA) | 6.47021 | 4.06771 | 6.33241 | 12.5388 |
CDS Structure of MLOC_59842
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_59842.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g51610.2 |
+1 |
0.0 |
522 |
260/318 (82%) |
13102.m05873 protein CRAL/TRIO domain containing protein, expressed |
TAIR PP10 |
AT1G22180.2 |
+1 |
2e-109 |
334 |
175/302 (58%) |
Sec14p-like phosphatidylinositol transfer family protein | chr1:7828434-7829745 REVERSE LENGTH=314 |