MLOC_59840 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.532055.101755.324436.08553
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)00.02153900.0263646
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)10.037810.49679.4066413.6117
NODDeveloping tillers at six leaf stage, 3rd internode000.006798980.0165361
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)0.4539080.1846900.970825



CDS Structure of MLOC_59840






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_59840.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK365411NoneNoneNoneNone
MLOC_59840.1CUST_4197_PI427708080AvailableAvailablecontig_43958 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g03290.1 -1 0.0 562 301/429 (70%) 13111.m00267 protein nucleoside-triphosphatase, putative, expressed
TAIR PP10 AT3G04080.1 -1 1e-116 358 202/404 (50%) | Symbols: ATAPY1, APY1 | apyrase 1 | chr3:1068068-1070917 REVERSE LENGTH=471