MLOC_59835 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.2103230.4296860.4189140.371216
LEAShoots from the seedlings (10 cm shoot stage)1.402931.857461.380941.27084
INF1Young developing inflorescences (5mm)0.9578670.8486020.806080.745285
INF2Developing inflorescences (1-1.5 cm)1.455431.382261.136631.4643
ROORoots from the seedlings (10 cm shoot stage)0.2535750.4747520.5180020.512302
NODDeveloping tillers at six leaf stage, 3rd internode0.258890.3608660.2649291.02986
CAR5Developing grain, bracts removed (5 DPA)0.7233710.5655230.5658480.582925
CAR15Developing grain, bracts removed (15 DPA)0.1797610.1759350.229570.433029



CDS Structure of MLOC_59835






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_59835.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_59835.1NoneAvailableAvailablecontig_43949 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g40400.1 -1 0.0 711 364/762 (48%) 13110.m03741 protein retrotransposon protein, putative, unclassified
TAIR PP10 AT3G52950.2 +2 1e-69 249 126/164 (77%) CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein | chr3:19634866-19636536 FORWARD LENGTH=556