- Predicted Gene MLOC_59814
MLOC_59814 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 8.09357 | 10.9759 | 7.65665 | 8.45472 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 13.8939 | 13.1318 | 16.0028 | 11.1334 |
| INF1 | Young developing inflorescences (5mm) | 10.8332 | 10.0652 | 11.4749 | 8.01345 |
| INF2 | Developing inflorescences (1-1.5 cm) | 7.05473 | 8.62191 | 7.80984 | 7.69494 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 3.26202 | 4.68628 | 4.15474 | 4.67313 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 3.38232 | 3.8968 | 5.21318 | 12.3991 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 8.16493 | 8.99197 | 8.11526 | 7.30119 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 3.14279 | 3.12304 | 2.91295 | 6.22828 |
CDS Structure of MLOC_59814
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_59814.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os04g32490.2 |
-2 |
2e-180 |
524 |
265/294 (90%) |
13104.m11888 protein tRNA nucleotidyltransferase/polyA polymerase family protein, putative, expressed |
| TAIR PP10 |
AT5G23690.1 |
-2 |
3e-165 |
491 |
268/465 (58%) |
Polynucleotide adenylyltransferase family protein | chr5:7987664-7990466 FORWARD LENGTH=527 |
