MLOC_59803 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.81492.042632.261382.30731
LEAShoots from the seedlings (10 cm shoot stage)0.5853910.1280190.08369650.223682
INF1Young developing inflorescences (5mm)0.1486930.4291260.1638340.237883
INF2Developing inflorescences (1-1.5 cm)0.03826920.1291390.1176390.111214
ROORoots from the seedlings (10 cm shoot stage)2.731443.013852.099793.23301
NODDeveloping tillers at six leaf stage, 3rd internode4.315453.94020.6487088.82556
CAR5Developing grain, bracts removed (5 DPA)0.07210260.0908380.04680730.0732397
CAR15Developing grain, bracts removed (15 DPA)0.0175276000.061346



CDS Structure of MLOC_59803






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_59803.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_59803.2CUST_14040_PI427708080AvailableAvailablecontig_43926 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g62480.1 +2 0.0 974 481/582 (83%) 13101.m06695 protein laccase precursor protein, putative, expressed
TAIR PP10 AT5G60020.1 +2 0.0 820 398/571 (70%) | Symbols: LAC17, ATLAC17 | laccase 17 | chr5:24168072-24170223 FORWARD LENGTH=577