MLOC_59802 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.0477384000.0314024
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0.5621780.2014830.2870230.268284
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_59802






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_59802.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK362619NoneNoneNoneNone
AK365414NoneNoneNoneNone
MLOC_59802.2CUST_6987_PI427708080AvailableAvailablecontig_43925 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g13180.1 +3 3e-144 418 219/296 (74%) 13103.m01527 protein peroxidase precursor, putative, expressed
TAIR PP10 AT5G06730.1 +3 2e-107 324 172/302 (57%) Peroxidase superfamily protein | chr5:2080207-2081621 REVERSE LENGTH=358