MLOC_59800 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.03442670.09158820.2298870.0836044
LEAShoots from the seedlings (10 cm shoot stage)0.45646300.09576270.162649
INF1Young developing inflorescences (5mm)0.8951730.6248040.496930.496696
INF2Developing inflorescences (1-1.5 cm)0.869481.235710.6364520.914387
ROORoots from the seedlings (10 cm shoot stage)0.116860.2062010.2207290.180605
NODDeveloping tillers at six leaf stage, 3rd internode0.08460740.2436860.1820380.638616
CAR5Developing grain, bracts removed (5 DPA)0.4904140.3074180.6872850.381815
CAR15Developing grain, bracts removed (15 DPA)0.4036530.4497540.352450.777614



CDS Structure of MLOC_59800






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_59800.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_59800.1CUST_8189_PI427708083AvailableAvailablecontig_43925 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g16990.1 -2 6e-154 294 137/269 (51%) 13104.m01539 protein retrotransposon protein, putative, unclassified
TAIR PP10None-----