MLOC_59797 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.825461.861412.0741.88106
LEAShoots from the seedlings (10 cm shoot stage)3.875113.244023.511723.01812
INF1Young developing inflorescences (5mm)2.993462.954192.824512.36508
INF2Developing inflorescences (1-1.5 cm)4.822994.495384.626044.86829
ROORoots from the seedlings (10 cm shoot stage)1.272481.89612.068422.14971
NODDeveloping tillers at six leaf stage, 3rd internode1.61582.521162.737868.03943
CAR5Developing grain, bracts removed (5 DPA)3.21543.259493.460213.06711
CAR15Developing grain, bracts removed (15 DPA)2.575612.623122.35585.52862



CDS Structure of MLOC_59797






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_59797.4
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_59797.4CUST_14039_PI427708080AvailableAvailablecontig_43925 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g42670.2 +2 0.0 1114 659/1245 (53%) 13108.m09315 protein resistance protein, putative, expressed
TAIR PP10 AT3G07040.1 +2 1e-57 218 209/805 (26%) | Symbols: RPM1, RPS3 | NB-ARC domain-containing disease resistance protein | chr3:2226244-2229024 REVERSE LENGTH=926