MLOC_59791 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains15.125127.937325.26521.9324
LEAShoots from the seedlings (10 cm shoot stage)9.903415.458364.03655.10891
INF1Young developing inflorescences (5mm)41.830232.587325.518827.1379
INF2Developing inflorescences (1-1.5 cm)25.165926.707120.118224.8092
ROORoots from the seedlings (10 cm shoot stage)10.386115.610413.627514.6394
NODDeveloping tillers at six leaf stage, 3rd internode15.532210.556111.113827.8186
CAR5Developing grain, bracts removed (5 DPA)18.184313.890716.358814.09
CAR15Developing grain, bracts removed (15 DPA)25.122425.306619.531751.8712



CDS Structure of MLOC_59791






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_59791.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_59791.1CUST_12849_PI427708083AvailableAvailablecontig_43916 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g04670.1 -2 3e-34 139 66/86 (77%) 13102.m00491 protein glucan endo-1,3-beta-glucosidase precursor, putative, expressed
TAIR PP10 AT5G58090.1 -2 7e-30 124 60/87 (69%) O-Glycosyl hydrolases family 17 protein | chr5:23505556-23507193 REVERSE LENGTH=477